Week five (Jun 26, 2023 - Jul 3, 2023)

This is the fifth week of my GSoC journey.

GSoC project

Tasks

  1. Create two new branches on the main repo: the 51-update-cellbox-readme and the test-github-actions.
    • For the former, update the installing steps for CellBox and update some details about the code and data files in README.md.
    • For the latter, get Github Actions to work, including updaing pytest.yml and setup.py to remove a bug.
  2. Implement ODE and kernel functions in Pytorch and write simple tests to ensure their correct behaviour.
  3. Continue updating part of the training loop.

Relevant issues:

  • 51-update-cellbox-readme (branch)
  • test-github-actions (branch)

Notes

Check out my personal GSoC notebook, where I keep my observations and comments in one place.